Dear all, I would like to do MD simulations of polymer binding to lipid bilayers.
To that end I have generated the following components: - CgenFF-based force field for the polymers' monomeric units (tested in NAMD/CHARMM) - CHARMM36 lipid force field for the lipid bilayers with some added lipids (tested in NAMD/CHARMM) On the internet (http://www.gromacs.org/Downloads/User_contributions/Force_fields) I found the appropriate force fields (CgenFF and CHARMM36 for lipids). How do I combine those with the monomeric residues I have generated with ParamChem? I'm very familiar with Charmm, where all the necessary force field can be easily combined, but I have no idea how to do it Gromacs. Also worth mentioning: I will generate the initial structures of the lipid bilayers and of the polymers in Charmm for Charmm is the only package that can generate structures using just the internal coordinates in the force field. Thanks in advance for any help and tips, Jernej Zidar -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
