On 11/08/2011 2:10 PM, R.Vidya Rajendran (10PHD013) wrote:
Hello Friends,

I would like to do simulation of a protein containing
'selenomethionine' [MSE] in coordinate file, during the first step of
pdb2gmx this residue is not recognizing by any of the force field and
getting fatal error 'Residue 'MSE' not found in residue topology
database'.

Please help me to rectify this problem

See http://www.gromacs.org/Documentation/Errors, like a recent version of GROMACS will have suggested that you do.

Mark

tahnks.


regards
vidya

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