Hello, I have a system with 128 emi (cations) and 128 Cl (anions).
I want to calculate how many CL atoms are in cutoff distance relative to hydorgen aotm of cation. I considered all CL atoms are distinguishable. Basically I want to calcualte the distance between each CL atom and correponing hydorgen and registered those CL atoms which are whthin cutoff. How can I do ? I am using Gromacs 4.0.7 version. Thanks Nilesh -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
