Thanks Sir, Thanks just now I figured it out!
With regards kavya On Wed, Jun 1, 2011 at 6:20 PM, Tsjerk Wassenaar <tsje...@gmail.com> wrote: > Hi Kavya, > > Each atom has three coordinates; 3*3740=11220 coordinates, yielding as > many eigenvalues and -vectors. > > Cheers, > > Tsjerk > > On Wed, Jun 1, 2011 at 2:44 PM, Kavyashree M <hmkv...@gmail.com> wrote: > > Dear users, > > > > I was using g_covar (gmx 4.5.3) to find the eigenvalue and > > eigenvectors. When I used for "protein" which is actually - 3740 in > > number, it gave a total of 11220 eigenvalues, similarly for bacbone, > > c-alpha atoms, the number of eigenvalues given was not matching > > with the number of atoms in question. > > I presume that the number of eigenvalues generated should correspond > > to the number of atoms considered in question. > > But the xpm file generated corresponds with the query given ie., protein, > > C-alpha or backbone as expected. > > > > Kindly clarify my doubts. > > > > Thank you > > With regards > > M. Kavyashree > > > > -- > > gmx-users mailing list gmx-users@gromacs.org > > http://lists.gromacs.org/mailman/listinfo/gmx-users > > Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > > Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to gmx-users-requ...@gromacs.org. > > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > > > -- > Tsjerk A. Wassenaar, Ph.D. > > post-doctoral researcher > Molecular Dynamics Group > * Groningen Institute for Biomolecular Research and Biotechnology > * Zernike Institute for Advanced Materials > University of Groningen > The Netherlands > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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