Hi,
When i used g_sgangle, i specified 2 index groups of 3 atoms each and gave
the -oa flag to get the angle between them. I got two columns of output
(besides the time index) - one with much larger values on the right (they
look reasonable) and one with much smaller values on the left. what is the
difference between these two outputs?
# This file was created Wed May 4 15:25:23 2011
# by the following command:
# g_sgangle -f ../../exp.1/fullsystem.md.restart.1.xtc -s
../../exp.1/fullsystem.md.restart.1.tpr -n helixorient.ndx -oa
exp1.cross.xvg
#
# g_sgangle is part of G R O M A C S:
#
# Gnomes, ROck Monsters And Chili Sauce
#
@ title "Angle between aproa and aprob"
@ xaxis label "Time (ps)"
@ yaxis label "Angle (degrees)"
@TYPE xy
0 0.803241 36.5593
150 0.995972 5.14453
300 0.909836 24.5173
thanks
Jeremy
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