Dear gmx-users, I intended to concantanate two trajectories with no similar time frames i.e., both files have distinct time frames. But once I combine the files many time frames are skipped, details are as follows:
File 1 has 2175 frames File 2 has 1232 frames I used the following command to concatenate: trjcat -f File1.xtc File2.xtc -o CombinedFile3.xtc Now I obtained in total 1266 frames instead of 3407 frames as expected. When I compared the CombinedFile3 with both File 1 and File 2, I found that it has somehow taken the first 34 frames from File 1 and rest of the frames belongs to File 2 i.e., the last file. I am unable to understand why trjcat skips the frames inspite of no similarity. I am using 4.5-beta version of Gromacs. I am also open to sharing the files, should that be needed. Any possible explanation as to why I am obtaining the combined trajectory with skipping frames, would be really helpful. Many Thanks, Lipi
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