On 4/20/2011 11:17 PM, Miah Wadud Dr (ITCS) wrote:
The MPI library is able to run other MPI jobs as well as other parallel Gromacs
runs, and it just seems like this run causes this difficulty. I am using
Platform MPI 8.1.
OK. That covers just one of the points I raised...
Mark
-----Original Message-----
From: gmx-users-boun...@gromacs.org [mailto:gmx-users-boun...@gromacs.org] On
Behalf Of Mark Abraham
Sent: Wednesday, April 20, 2011 12:46 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] dhfr-impl-1nm.bench run keeps failing
On 4/20/2011 6:57 PM, Miah Wadud Dr (ITCS) wrote:
Hello,
I am trying to run the dhfr-impl-1nm.bench benchmark but this keeps failing.
I am using Gromacs 4.5.3 built using both Intel and PGI compilers, but both
builds fail with the error message:
MPI Application rank 1 exited before MPI_Finalize() with status 0
The rank and the status value vary. Any idea what could be wrong?
No idea. That's just a generic advisory from the MPI library. Only the
mdrun stdout or .log file could have a GROMACS-specific diagnostic
message. You need to be sure that you can run other MPI programs, too.
Mark
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