Dear Sir, Thank you for your suggestion regarding coulomb type and LIE method. I have successfully done the job. But now I am facing another type of problem. I am performing simulation of a protein ligand complex where the ligand is sitting deep inside the grrove of the protein. When I have done the molecular dynamic simulation , its showing an error as : Number of grid cells is zero. probably the system and the box collpased. I have searched through the mailing list, but I failed to get a proper answer. I have run the simulation in discovery studio and the simulation was successfully done.Please suggest me in this regard.
Your's sincerely Devawati Dutta
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists