Dear Tsjerk, Thank you. Problem solved. g_rms -s em.tpr -f run.trr -o rmsd.xvg xmgrace rmsd.xvg
25 Ocak 2011 14:51 tarihinde Tsjerk Wassenaar <tsje...@gmail.com> yazdı: > Hi Ahmet, > > That sort of indicates that the file is not there, doesn't it? > Maybe you're not doing what you expect to be doing, or doing it somewhere > else. > > Cheers, > > Tsjerk > > > 2011/1/25 ahmet yıldırım <ahmedo...@gmail.com>: > > Dear users, > > > > g_rms -s em.tpr -f run.xtc > > Select group for least squares fit: > > Selected 2: 'Protein-H' > > Select group for RMSD calculation > > Selected 2: 'Protein-H' > > > > I didn't had such a problem in other samples. But now, I have the error > as > > the following: > > > > Program g_rms, VERSION 4.5.3 > > Source code file: gmxfio.c, line: 519 > > > > Can not open file: > > run.xtc > > > > -- > > Ahmet YILDIRIM > > > > -- > > gmx-users mailing list gmx-users@gromacs.org > > http://lists.gromacs.org/mailman/listinfo/gmx-users > > Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > > Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to gmx-users-requ...@gromacs.org. > > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > > > > -- > Tsjerk A. Wassenaar, Ph.D. > > post-doctoral researcher > Molecular Dynamics Group > * Groningen Institute for Biomolecular Research and Biotechnology > * Zernike Institute for Advanced Materials > University of Groningen > The Netherlands > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- Ahmet YILDIRIM
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