Nilesh,
In the time it take Justin to answer, you can already have tested some
of this out for yourself. Pick a single window and run the pull-code
dynamics and then look at the trajectory with VMD and plot the
coord.xvg file and check the distance by g_dist. You'll learn a lot
more like this.
Chris.
-- original message --
Justin,
I considered single ion- pair.
sorry for typing mistake (I wrote 4 ion-pairs).
How can I define distance range.
ONe more my cation and anion are close in box edges in my equilibrated
strucutre.
By defining pull_rate1 = -0.01 can cation and anion will come close
to each other?
Nilesh
Does will it affect on results?
--
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