Dear Justin I had a crashed run and continued it by tpbconv and mdrun. After that in order to analysis the results of new MD run I used of this command trjcat -s md2.tpr -settime But when I want to compute RMSD, DSSP, ... I do not know how I can put together the results of MD1 (crashed run) and MD2 (continued one) to have the homogeneous results. Could you please help me in this regard? thanks in advance Shiva
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