i am reading the velocities from trajectory file.so i dont want the maxwellain distribution of veloc thats y i have set gen_vel=no.
sree On Mon, Nov 29, 2010 at 7:32 PM, Baofu Qiao <qia...@gmail.com> wrote: > > Why don't use different random (gen_vel =yes; gen_seed =-1 in .mdp > file) seed to generate the velocity? > > > On 11/29/2010 02:55 PM, sreelakshmi ramesh wrote: > > Dear all, > > could anybody help me out with the following issue. I have > a > > trajectory file.i have to used that file at a particular frame as the > > input to continue the simulation and i need to use that file for 20 > > independent simulations.since the starting file for the 20 simulations > are > > the same coordinate and velocity the 20 simulations are producing the > same > > output trajectory.so is there a way to change the velocity by a small > > value in the input trajectory file so that every time i can get a diff > > trajectory from same input file. > > > > reagrds, > > sree. > > > > > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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