Gloria Saracino wrote:
Hi everybody,
I would like to submit a biotinilated peptide to MD with 53a6 force field. Do
you know where I can look for the topology and parameters file?
I would start with a literature search, then the Users' Contribution section of
the Gromacs site, then perhaps poke around Google.
If nothing turns up, then you've got a long road of parameterization ahead of
you.
http://www.gromacs.org/Documentation/How-tos/Parameterization
-Justin
thank you in advance
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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