pawan raghav wrote:
Below is the hbond.xvg content 1 coloumn is for time second for numbers, but I am not getting for 3rd one i.e. Pairs within 0.35 nm is this shows area in cutoff range?

Search the mailing list archive. I answered this identical question last week. If you use the phrase "g_hbond third column" (without quotes) you'll find your answer.

-Justin

@ title "Hydrogen Bonds"

@ xaxis label "Time"

@ yaxis label "Number"

@TYPE xy

@ view 0.15, 0.15, 0.75, 0.85

@ legend on

@ legend box on

@ legend loctype view

@ legend 0.78, 0.8

@ legend length 2

@ s0 legend "Hydrogen bonds"

@ s1 legend "Pairs within 0.35 nm"

0 2 175

3 2 188

6 3 190

9 4 190

12 2 190

15 3 182

18 0 183

21 3 179



--
Pawan


--
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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