On 8/14/10, pawan raghav <pwnr...@gmail.com> wrote: > > I have done PCA using first g_covar and got eigval.xvg and eigenvec.trr > files. The eigenvectors were analyzed by g_anaeig program and got > eigcomp.xvg, eigrmsf.xvg, proj.xvg, and 2dproj.xvg files. Then I want to > know > 1. Which file among these shows relative positional fluctuation with > eigenvector index. > 2. Probability distributions for the displacements along several > eigenvectors. > 3. Absolute values of the projections of the (normalized) extracted > vectors. > 4. Cumulative percentage of the motion of a protein from eigvalues.xvg > file > > -- > Pawan >
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