Thanks Rossen, > Try it again with the latest release-4-5-branch, Erik added a lot of fixes.
Indeed, when I did my report *was* with Erik's mods, which I am afraid, was what broke the compilation. I am using 'git log': Author: Rossen Apostolov <[email protected]> Date: Thu Aug 12 11:20:18 2010 +0200 Fixed a reverted version string in configure.ac BTW, is there simpler way to say the "revision number" in git like 'svn info'? Thanks Alan On 12 August 2010 12:11, Alan <[email protected]> wrote: > Hi there, > > I am trying now to compile mdrun-openmm, by doing: > > cmake -DGMX_OPENMM=ON .. > > make mdrun > > -- Threads not compatible with OpenMM build, disabled > CMake Warning at CMakeLists.txt:127 (message): > The OpenMM build does not support other acceleration modes! > > -- Using internal FFT library - fftpack > -- Loaded CMakeASM-ATTInformation - ASM-ATT support is still experimental, > please report issues > -- Configuring done > -- Generating done > -- Build files have been written to: /Users/alan/Programmes/gromacs/build > dhcp-128-232-144-215[2416]:~/Programmes/gromacs/build% make mdrun > [ 0%] Building NVCC (Device) object > src/kernel/gmx_gpu_utils/./gmx_gpu_utils_generated_memtestG80_core.cu.o > [ 1%] Building NVCC (Device) object > src/kernel/gmx_gpu_utils/./gmx_gpu_utils_generated_gmx_gpu_utils.cu.o > > ... > > And then I got this error: > > ... > [ 56%] Building C object > src/gmxlib/CMakeFiles/gmx.dir/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c.o > /Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c: > In function ‘nb_kernel400nf_x86_64_sse’: > /Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:630: > error: ‘gmx_invsqrt_exptab’ undeclared (first use in this function) > /Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:630: > error: (Each undeclared identifier is reported only once > /Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:630: > error: for each function it appears in.) > /Users/alan/Programmes/gromacs/src/gmxlib/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c:630: > error: ‘gmx_invsqrt_fracttab’ undeclared (first use in this function) > make[3]: *** > [src/gmxlib/CMakeFiles/gmx.dir/nonbonded/nb_kernel_x86_64_sse/nb_kernel400_x86_64_sse.c.o] > Error 1 > make[2]: *** [src/gmxlib/CMakeFiles/gmx.dir/all] Error 2 > make[1]: *** [src/kernel/CMakeFiles/mdrun.dir/rule] Error 2 > make: *** [mdrun] Error 2 > > Thanks, > > Alan > > -- > Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate > Department of Biochemistry, University of Cambridge. > 80 Tennis Court Road, Cambridge CB2 1GA, UK. > >>http://www.bio.cam.ac.uk/~awd28<< > -- Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate Department of Biochemistry, University of Cambridge. 80 Tennis Court Road, Cambridge CB2 1GA, UK. >>http://www.bio.cam.ac.uk/~awd28<<
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