HI how to calculate SASA of micelle using g_sas? i put -n -micelle-index.ndx , where micelle-index.ndx includes all of the atom numbers of micelle.
if micelle is not compact enough but there are no water molecules inside the micelle, will g_sas calculate the vacancy part inside the micelle? Or, if there exists water molecules inside the micelle, will g_sas calculate the water/micelle interface part inside the micelle? Thank you Lin
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