Hi, please I'm trying to measure an hbond between 2 specific atoms. When I used g_hbond I didn't the result I expected because it doesn't specify the atoms that constitute the H bond. Now I'm trying with g_dist but I encountered a problem: when I do the following in my index file:
r 172 & a HD2 it tells me: empty group So please can anyone help me? Thank you. Carla
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php