How come time is always 0.0000000 On Tue, Mar 9, 2010 at 8:16 AM, Justin A. Lemkul <[email protected]> wrote: > > > John Shultz wrote: >> >> Hello, >> >> I am seeking clarification on what this output means. I believe it >> says that the x axis is divided into 4 time intervals and they are >> plotted against a y axis that measures total distance along all 3 >> dimensional coordinates. >> Am I reading this correctly? >> > > There should be no decomposition of time intervals here. Distance is > plotted continuously as a function of time. The first column is time, then > the total distance, then each of the x, y, and z components of that > distance. > > -Justin > >> # This file was created Sat Jan 30 00:20:03 2010 >> # by the following command: >> # g_dist -f md.gro -s md.tpr -n index.ndx >> # >> # g_dist is part of G R O M A C S: >> # >> # Glycine aRginine prOline Methionine Alanine Cystine Serine >> # >> @ title "Distance" >> @ xaxis label "Time (ps)" >> @ yaxis label "Distance (nm)" >> @TYPE xy >> @ view 0.15, 0.15, 0.75, 0.85 >> @ legend on >> @ legend box on >> @ legend loctype view >> @ legend 0.78, 0.8 >> @ legend length 2 >> @ s0 legend "|d|" >> @ s1 legend "d\sx\N" >> @ s2 legend "d\sy\N" >> @ s3 legend "d\sz\N" >> 0.0000000 0.0619448 0.0583303 0.0099401 -0.0183282 >> >> >> >> > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [email protected]. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
-- John Shultz 202-494-1707 -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
