Dear users,Happy new yera to all. I have just a very simple query..I am running a simulation for 100 ns. I have decided to run it by 10 ns step of each. In every run, the gromacs generated confout.gro file, the traj.trr, traj.xtc, md.log , ener.edr file, state.cpt etc. The next time when i run the simulation for the next 10 ns , I have edited the em.mdp file and just change the tinit to the last time that i was run and the nsteps to 5000000 for 10 ns. And the command i used for grompp is ... grompp -f em.mdp -c confout.gro -p topol.top -o topol.tprĀ And then it will generate the topol.tpr file. and the command is then mdrun My question is is that oaky ... or I have to use any more file in the grompp command like that traj.trr or state.cpt for tracking velocity?? Thnx... /HenryBiochemistry.
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php