Itamar Kass wrote:
Hi,

Lately few of my simulations had ended up with wired output:

Writing final coordinates.
step 500000, remaining runtime: 0 s [xn068:94365] *** Process received signal ***
[xn068:94365] Signal: Segmentation fault (11)
[xn068:94365] Signal code: Address not mapped (1)
[xn068:94365] Failing at address: 0x108ee9000
[xn068:94365] [ 0] 2 libSystem.B.dylib 0x00000000844e83fa _sigtramp + 26 [xn068:94365] [ 1] 3 ??? 0x0000000000801b78 0x0 + 8395640
[xn068:94365] *** End of error message ***


In addition, the output files are not usable. We use apple with 10.5 (server version) and gromacs (4.0.5) is compiles using 64bit.

Any idea someone?

What was the command line? What's the end of the .log file? What filesystem are you using? Did it fill?

Mark
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