Hi, This is strange, 'cause on the site under installing (using MPI) it is written "*In GROMACS 4.x, some of the utility programs are also MPI-aware, but these will only be for compute-intensive utilities (e.g. that diagonalize large matrices, or calculate autocorrelations, etc.).*". So I guess there are more parallel things then just MD.
Cheers, Itamar On Wed, Oct 14, 2009 at 10:48 AM, Mark Abraham <mark.abra...@anu.edu.au> wrote: > Itamar Kass wrote: >> >> Hi, >> >> I wonder if there a way to run g_cover in paralel in order to make >> things run faster? > > No. Obviously you can use -dt to reduce the number of frames you analyze. > >> Also, what analysis programs can run in parallel? > > None in 4.0.x. Not sure about future plans. > > Matk > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
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