You need to run MPI jobs with 'mpirun'. The correct command would be
mpirun -np 8 mdrun -s topol.tpr
(I don't know what the -N 8 does).
Sander
On 16 Sep 2009, at 18:03 , Jarol E. Molina wrote:
Hi all
I have a single machine with multilpe processors. I want run mdrun
with 8 processors and I use the options
% mdrun – np 8 -s toppl.tpr -v -N 8
I see in the system monitor that just one procesor is running, if I
use
%mdrun_mpi -np 8 -s topol.tpr -v -N 8
I see the same in the system monitor
Any suggestion would be of great help
--
Jarol E Molina, I.Q., M.S.
Estudiante Doctorado en Ingeniería - Sistemas Energéticos
Universidad Nacional de Colombia - Sede Medellín
[email protected]
[email protected]
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