hi everyone, I have a pdb file of my system and i want it to be fed into the GROMACS software. I have a new force field for the simulation and i have made the .top file manually which includes the new library FF files. I need to get a .gro file from the .pdb file that i have. So, is there a way out to do this without incorporating pdb2gmx because i dont use the standard FF and i dont really have all the other datafiles for the new FF except for necessary bond and nonbonded infos.
Amit
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