Hi Justin, Thanks for the expedient reply. In the MARTINI tutorial they have provided two water.gro files one for lipids and the other for proteins. Protein water molecule file consists of 10800 atoms of water and the lipid has 400 atoms. So even if I simulate any protein structure after converting that to CG, can I use the same water.gro file for protein always?
Sunny _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
