but i dnt find any 'type' column in my topology file..the grompp programm with this top file works gud in 3.3 version..im having 4.0.5 version..is that can be issue?? shud i try in 3.3 version
On Thu, Aug 6, 2009 at 2:48 PM, Justin A. Lemkul <jalem...@vt.edu> wrote: > > > mohit kumar wrote: > >> im running energy minimization for POPC bilayer but its showing error >> which i cant figure out >> >> -- ------------------------------------------------------- >> Program grompp, VERSION 4.0.5 >> Source code file: topdirs.c, line: 99 >> >> Fatal error: >> Invalid pairs type 0 >> >> what does this pair type mean and how can i solve it?? plz help me >> >> > The error message is pretty clear. Somewhere within the topology, you have > a "0" in the "type" column, which doesn't correspond to any known pair type. > > -Justin > > >> >> MOHIT KUMAR >> Molecular Biochemistry & Biophysics >> Graduate Student >> Illinois Institute of Technology >> Chicago,IL, USA >> >> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> gmx-users mailing list gmx-users@gromacs.org >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at http://www.gromacs.org/search before >> posting! >> Please don't post (un)subscribe requests to the list. Use the www >> interface or send it to gmx-users-requ...@gromacs.org. >> Can't post? Read http://www.gromacs.org/mailing_lists/users.php >> > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- MOHIT KUMAR Molecular Biochemistry & Biophysics Graduate Student Illinois Institute of Technology Chicago,IL, USA
_______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
