Hi,
we are trying to run mdrun_mpi in a public cluster of our university. However,
we got the following error:
/etc/profile.d/limits.sh: line 1: ulimit: max locked memory: cannot modify
limit: Operation not permitted
/var/tmp/sge_local_spool/r01n19/job_scripts/3051: line 10: grompp_mpi: command
not found
The
cluster has already settled to unlimited access to memory. However,
grompp hasn't have permission to modify this file (limits.sh).
I would like to disable the ulimit function at source file from GROMACS. How
can I do that?
Thanks,
Dr Gustavo Fioravanti Vieira Núcleo de Bioinformática do Laboratório de
Imunogenética Bolsista PNPD do Programa de Pós-Graduação em Genética e
Biologia MolecularUFRGS
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