xi zhao wrote:
Dear Sirs:
I wang to know simulate coarse-graied system using gromacs, but I don
not know how to use atom2cg.awk to convert CG model!
Thank you very much!
./atom2cg_v2.1_tryout.awk my.pdb > out.pdb
Note that the script available online needs to be modified to include a $5
between the $4 and $6 on each line, otherwise you will get an
incorrectly-formatted .pdb file.
-Justin
4
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--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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