This is the new entry I added to the rtp file. [ PDM ]
[ atoms ] SI SI 0.300 1 CH3 opls_069 0.000 1 O opls_108 -0.300 1 [ bonds ] SI O 0.190 158805.0 SI CH3 0.164 293160.0 [ dihedrals ] CH3 SI O SI 3.77 3 0 SI O SI CH3 3.77 3 0 O SI O SI 3.77 3 0 On Wed, Apr 29, 2009 at 3:57 PM, Justin A. Lemkul <jalem...@vt.edu> wrote: > > > Yanmei Song wrote: > >> ------------------------------------------------------- >> Program pdb2gmx, VERSION 3.3.3 >> Source code file: resall.c, line: 289 >> >> Fatal error: >> in .rtp file at line: >> >> >> ------------------------------------------------------- > > Well that's not a terribly helpful error message, is it? :) > > There is probably something wrong with the .rtp entry you created. If you > can post that, perhaps someone can spot it. > > -Justin > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > _______________________________________________ > gmx-users mailing list gmx-us...@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Yanmei Song Department of Chemical Engineering ASU _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php