nitu sharma wrote:
Dear all,
Thanks for solving my problems.But i have one new
problem is I have to Insert my protein into dmpc lipid bilayer before
doing simulation that bilayer file i got from teleman website can
anybody help me in doing this process using gromacs-4.0.3.
clue- I have ,
- protein pdb file
-lipid pdb file .
what should i have to do next using gromacs.
There are a variety of ways to insert your protein. Many are described in the
list archive (hint: search!) Another option (again available from Tieleman's
site) is the InflateGRO program.
-Justin
please if anybody knows about that let me know its very critical problem
for me.
Thank you very much in advance.
Nitu Sharma
School of life Sciences
Jawaherlal Nehru University
New Delhi , India
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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