Tom Venken wrote:
Mu-Z Coul-SR:r_8-r_8 LJ-SR:r_8-r_8 LJ-LR:r_8-r_8
Coul-14:r_8-r_8 LJ-14:r_8-r_8 Coul-SR:r_8-rest LJ-SR:r_8-rest
LJ-LR:r_8-rest Coul-14:r_8-rest LJ-14:r_8-rest Coul-SR:rest-rest
LJ-SR:rest-rest LJ-LR:rest-rest Coul-14:rest-rest LJ-14:rest-rest
The rest of the protein has to be one of your energy groups, otherwise the only
groups are r8 and everything else in your system.
Once you've done that you'll see terms like Coul-SR:r_8-Protein_&_!r_8 (or
something like that), as long as your index groups are set up correctly.
-Justin
--
========================================
Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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