Eudes Fileti wrote:
David thanks for the reply, it was that such references I was looking for. One more little thing. These models describe poorly only the D of the water or for the other solvents too? Bests
You have the experimental values there for both simulation and experiments, for pure compounds and mixtures. Water is off more than the other molecules IIRC.

eef

    Message: 6
    Date: Tue, 03 Mar 2009 22:41:04 +0100
    From: David van der Spoel <sp...@xray.bmc.uu.se
    <mailto:sp...@xray.bmc.uu.se>>
    Subject: Re: [gmx-users] Diffusion coefficients ( Exp X Simul )
    To: Discussion list for GROMACS users <gmx-users@gromacs.org
    <mailto:gmx-users@gromacs.org>>
    Message-ID: <49ada3f0.4090...@xray.bmc.uu.se
    <mailto:49ada3f0.4090...@xray.bmc.uu.se>>
    Content-Type: text/plain; charset=ISO-8859-1; format=flowed

    Eudes Fileti wrote:
     > Hello, someone could suggest me references
     > which discusses the difficulty of obtaining
     > values for diffusion coefficients in agreement
     > to the experimental values? For water that
     > is well known, but I do not know of any
     > reference that discusses this topic

    You mean that models do not reproduce D?
    You could have a look at JCP 119 pp. 7308-7317 (2003) and references
    therein. There is quite a lot of literature.

     > Thanks
     > eef
     > _______________________________________
     > Eudes Eterno Fileti
     > Centro de Ciências Naturais e Humanas
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     >
     >
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David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:  +46184714205. Fax: +4618511755.
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