Hi, i want to calculate rmsd on homologous protein structures that have different residue numbers. As far as i understood g_rms gives only rmsd of the same structure in different configurations, but it doesn't fit homologous protein structures?
In Option -f2 can i provide a trajectory of a homologous protein structure of it also have to be a reserence structure trajectory (which is provided in -s)? many many thanks Tatsiana _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
