Hi,

> i m just getting started to Gromacs
> but i have included porse.itp in my topology file.
> i m not getting that what does this mean

Here you can find some great information:
http://www.gromacs.org/documentation/reference/online/speptide.html#posres

There are great tutorials and sites out there, that might help to get
started with gromacs, some are
http://www2.umdnj.edu/~kerrigje/pdf_files/fwspidr_tutor.pdf
http://md.chem.rug.nl/education/mdcourse/MDpract.html

http://www.gromacs.org/documentation/reference/online.html

-- 
###################################
Volker Wirth
Center for Medical Physics and Technology
Biophysics Group
FAU Erlangen-Nuremberg

Email: vwirth%at%biomed.uni-erlangen.de
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