Lee Soin wrote:
I try to compile GROMACS with a combination of icc and ifort. Error
occurs. These are the last lines of the compilation message:
Making install in gmx_blas
make[3]: Entering directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_blas'
make[4]: Entering directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_blas'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_blas'
make[3]: Leaving directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_blas'
Making install in gmx_lapack
make[3]: Entering directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_lapack'
make[4]: Entering directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_lapack'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_lapack'
make[3]: Leaving directory
`/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib/gmx_lapack'
make[3]: Entering directory `/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib'
/bin/sh ../../libtool --tag=CC --mode=compile
/disk2/junwang/soft/intel/cc/10.1.018/bin/icc -DHAVE_CONFIG_H -I.
-I../../src -I/usr/X11R6/include -I/usr/include/libxml2 -I../../include
-DGMXLIBDIR=\"/disk2/junwang/soft/gromacs4/share/top\"
-I/disk2/junwang/soft/fftw32_mpi/include -O3 -w -funroll-all-loops -MT
libxdrf.lo -MD -MP -MF .deps/libxdrf.Tpo -c -o libxdrf.lo libxdrf.c
/disk2/junwang/soft/intel/cc/10.1.018/bin/icc -DHAVE_CONFIG_H -I.
-I../../src -I/usr/X11R6/include -I/usr/include/libxml2 -I../../include
-DGMXLIBDIR=\"/disk2/junwang/soft/gromacs4/share/top\"
-I/disk2/junwang/soft/fftw32_mpi/include -O3 -w -funroll-all-loops -MT
libxdrf.lo -MD -MP -MF .deps/libxdrf.Tpo -c libxdrf.c -o libxdrf.o
libxdrf.c(112): error: identifier "XDR_INT_SIZE" is undefined
cnt += XDR_INT_SIZE;
^
libxdrf.c(140): error: identifier "XDR_INT_SIZE" is undefined
cnt += XDR_INT_SIZE;
^
compilation aborted for libxdrf.c (code 2)
make[3]: *** [libxdrf.lo] Error 1
make[3]: Leaving directory `/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib'
make[2]: *** [install-recursive] Error 1
make[2]: Leaving directory `/disk2/junwang/soft/src/gromacs-4.0/src/gmxlib'
make[1]: *** [install-recursive] Error 1
make[1]: Leaving directory `/disk2/junwang/soft/src/gromacs-4.0/src'
make: *** [install-recursive] Error 1
OK, that confirms my bug report here
http://bugzilla.gromacs.org/show_bug.cgi?id=235.
I describe a workaround there.
Mark
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