On Thu, Oct 09, 2008 at 02:06:30PM +0000, Rebeca García Fandiño wrote: > > Hello, > I am trying to calculate the area per lipid for a quite big membrane formed > by a unique type o lipid (DOPC). I can see ondulations in the membrane, so I > am not sure of the right area I should have to employ, because the max and > min values in x and y axes are not representative for the real area of each > layer. > Could anybody suggest how could I calculate this paremeter in this type of > simulations?
calculate the solvent-accessible surface area using a Really Large probe? cheers, marc -- Marc F. Lensink Centre for Structural Biology and Bioinformatics CSBB Université Libre de Bruxelles [EMAIL PROTECTED] Boulevard du Triomphe - CP 263, B-1050 Brussels, Belgium tel: +32 2 650 5411 secr: +32 2 650 2013 fax: +32 2 650 5425 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
