vivek sharma wrote:
hi All,
My apologies for putting a question out of gromacs.
I was trying to superimpose pdb entry of one molecule over other, I tried it using PYMOL, CHIMERA and vmd ..they are simply opening one molecule over other. Is there any specific function in any of the visualization tool, that can solve my purpose...


In Chimera: Tools --> Structure Comparison --> MatchMaker. Documentation is at the Chimera site.

-Justin

Thanks in advance..

Vivek


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Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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