minnale wrote: > > Hi all, > I have extended popc bilayer(intial popc.pdb from Dr.Tielmen site) by > using genbox command, I issued > genbox -cs popc128a.gro -o out.gro -box 9.2 9.2 6.9 it ran successfully with > increase of popc and water molecules. > Now I want to visualise this out file in VMD in a way that in eachleaflet > how many popc molecules and water residues are there, May be this is trivial > query. > Could you give me suggestion.
If you want to enlarge a membrane patch, use genconf. Not genbox! jochen > > > ------------------------------------------------------------------------ > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- ************************************************ Dr. Jochen Hub Max Planck Institute for Biophysical Chemistry Computational biomolecular dynamics group Am Fassberg 11 D-37077 Goettingen, Germany Email: jhub[at]gwdg.de Tel.: +49 (0)551 201-2312 ************************************************ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
