> Following is the scenario I am trying for MDS > I am using vmd to modify the position of my molecule, and then output from > vmd is in .pdb format. > for .top file I have generated those files from pdb2gmx and edited them > manually as suggested in drug-enzyme tutorial by J E Kerrigan. > > Now, I am in doubt weather I can use the .pdb from vmd & .top file for > running editconf and genbox followed by MDS ?
Why not? -- Vitaly V. Chaban School of Chemistry National University of Kharkiv Svoboda sq.,4, Kharkiv 61077, Ukraine email: [EMAIL PROTECTED] skype: vvchaban tel.: +38-097-8259698 _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
