Thanks for your response. I followed the instruction in CVS. my architecture is x86-64, and compiler is gcc. thanks. I will try 3.3.3 -Xianghong Qi
On Tue, Sep 16, 2008 at 4:02 PM, Justin A. Lemkul <[EMAIL PROTECTED]> wrote: > > > xianghong qi wrote: > >> Hi, everyone: >> >> I am a beginner for Gromacs. I am using the latest version Gromacs 4.0 >> beta1. Then I follow the tutorial part: Introduction to MD < >> http://md.chem.rug.nl/education/mdcourse/> by the Groningen group. >> Compiling is ok, but I always get the Segmentation fault when I use command >> : genbox -cp minimized_box.gro -cs spc216.gro -o minimized_water.gro -p >> aki.top. Also I get the same problem when i try other exercises. Does >> anyone has same problem like me ? or can anyone >> give me a hint for that? Thanks in advance. >> > > It sounds like your installation is faulty. What architecture are you > running on? What compilers did you use? > > If you are just starting out, it is probably better to use an official > release of Gromacs (the latest being 3.3.3), since 4.0beta1 is still in > development. > > -Justin > > >> -Xianghong Qi >> >> -- >> Postdoctoral Associate >> Department of Chemistry >> University of Pittsburgh >> Chevron Science Center >> 219 Parkman Avenue >> Pittsburgh, PA 15260 >> Office: 338 EBERLY >> Phone: 412-383-5400 >> >> >> Some people make the world more special just by being in it. >> >> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> gmx-users mailing list gmx-users@gromacs.org >> http://www.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at http://www.gromacs.org/search before >> posting! >> Please don't post (un)subscribe requests to the list. Use the www >> interface or send it to [EMAIL PROTECTED] >> Can't post? Read http://www.gromacs.org/mailing_lists/users.php >> > > -- > ======================================== > > Justin A. Lemkul > Graduate Research Assistant > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Postdoctoral Associate Department of Chemistry University of Pittsburgh Chevron Science Center 219 Parkman Avenue Pittsburgh, PA 15260 Office: 338 EBERLY Phone: 412-383-5400 Some people make the world more special just by being in it.
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