Thanks for the help. Here is what I learned... Yes, VMD is able to render the PLT format using the PLT Plugin: http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/pltplugin.html
Download the plugins at the bottom of this page: http://www.ks.uiuc.edu/Research/vmd/plugins/ Regards, Matt --- Matt Wyczalkowski Doctoral Candidate, Biomedical Engineering Pappu Lab: http://lima.wustl.edu Washington University in St. Louis On Tue, Sep 2, 2008 at 8:58 PM, Florian Dommert <[EMAIL PROTECTED]> wrote: > Hello, > > somebode told me, that VMD is also able to render the SDF plot. However I > have not tested it so far. > > Good Luck, > > Flo > > On 03.09.2008, at 01:28, Matt Wyczalkowski wrote: > >> I'm looking into using g_sdf for analysis. The instructions suggest >> using gOpenMol: "The output will be a binary 3D-grid file >> (gom_plt.dat) in the .plt format that can be be read directly by >> gOpenMol." >> >> However, the gOpenMol web site does not distribute Mac binaries (nor >> source). I am using Mac OS X 10.5 (ppc). >> >> Are gOpenMol Mac binaries available? Or, are there alternative >> visualization packages which would be suitable for displaying g_sdf >> output? >> >> Thanks in advance for your help. >> >> Regards, >> >> Matt >> _______________________________________________ >> gmx-users mailing list gmx-users@gromacs.org >> http://www.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at http://www.gromacs.org/search before posting! >> Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to [EMAIL PROTECTED] >> Can't post? Read http://www.gromacs.org/mailing_lists/users.php >> > > -- > Florian Dommert > Dipl.-Phys. > > Computational and Theoretical Softmatter & Biophysics group > > Frankfurt Institute for Advanced Studies > Johann-Wolfgang-Goethe University > > Ruth-Moufang-Str. 1 > 60438 Frankfurt am Main > > Phone: +49(0)69 / 798 - 47522 > Fax: +49(0)69 / 798 - 47611 > > EMail: [EMAIL PROTECTED] > Home: http://fias.uni-frankfurt.de/~simbio/Florian_Dommert > > > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
