Vitaly Chaban wrote:
I wanted to perform some simulations backward and forward in time (for
transition path sampling ). If I specify a negative value for 'dt' in the
mdp file, would that work for backward integration of the equations of
motion ?
Time does not run back. :) It's a bad idea.
I think it will work, but I'm not sure whether this is the best solution
to the problem of transition path sampling.
--
David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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