Hi all,
I want to analyse secondary struture of my protein which have run MD for 7ns.
I have checked in archives about do_dssp, found that can use only .pdb file
instead of .trr and .tpr. Then if type command with -h it has it has given
.xtc, .tpr, and .ndx should use.
I am bit confusing with about do_dssp command.
Can you explain me clearly.
Thanks in advance.
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