serdar durdagi wrote:
Dear all,
I would like to make a series of simulation with drug in lipid with
increasing concentration.
In order to combine two files and delete overlapping lipid molecules
from the ligand, I am using genbox option (genbox -cp drg.pdb -cs
lipid.pdb -o lipid2.pdb).
For more than one drug, how can I use this option?
Have multiple drug molecules present in the drg.pdb file, but at such a distance
that lipids can actually be placed between them without generating enormous voids.
-Justin
Thank you.
Serdar
__________________________________________________
Do You Yahoo!?
Sie sind Spam leid? Yahoo! Mail verfügt über einen herausragenden Schutz
gegen Massenmails.
http://mail.yahoo.com
------------------------------------------------------------------------
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
