Travis Craddock wrote:
Hi All,
I modified an existing pdb file by adding a missing residue with coordinates
obtained from another pdb file of lower resolution. I ran pdb2gmx and
received the following fatal error:
Atom CA not found in residue MET1 while adding hydrogens
Can someone please explain this error to me?
Maybe...If you provide your pdb2gmx command line, which force field you're
using, and which Gromacs version you're using.
-Justin
Thanks,
Travis
Travis Craddock
Department of Physics
University of Alberta
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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