Quoting sudheer babu <[EMAIL PROTECTED]>: > HI all, > My simulation crashed mid of the run , I genrated restart.tpr by using > tpbconv command for restart my simulation, Then I when I give mdrun -v > -deffnm restart.tpr > > It showed below mentioned two lines and stopped. > "Wrote pdb files with previous and current coordinates > step 0, will finish at Sat May 3 02:07:06 2008Segmentation fault" > Could you tell me the reason > Thanks for your appreciation >
Did your simulation crash with a segmentation fault/LINCS warnings, etc? If so, tpbconv won't magically rescue your simulation, there's something physically unreasonable about it and you need to reconsider your minimization/equilibration scheme. -Justin ======================================== Justin A. Lemkul Graduate Research Assistant Department of Biochemistry Virginia Tech Blacksburg, VA [EMAIL PROTECTED] | (540) 231-9080 http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/ ======================================== _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
