It means:
Include the topology, you got from the PRODRG server as an itp file in
your general topology file....
If you don't know, what I mean, read the manual about including
topologies...
Btw, more info, more answer
regards
Maik Goette, Dipl. Biol.
Max Planck Institute for Biophysical Chemistry
Theoretical & computational biophysics department
Am Fassberg 11
37077 Goettingen
Germany
Tel. : ++49 551 201 2310
Fax : ++49 551 201 2302
Email : mgoette[at]mpi-bpc.mpg.de
mgoette2[at]gwdg.de
WWW : http://www.mpibpc.gwdg.de/groups/grubmueller/
s lal badshah wrote:
Hi All,
I have taken the GTP topology from PRODRG server but now how can I make
a connection with my original topology file: As in Errors of Gromacs it
is mentioned
==> find a topology file
<http://wiki.gromacs.org/index.php/topology_file> for the residue /
molecule and include as a .itp file
<http://wiki.gromacs.org/index.php/.itp_file>,
what does it means? I am using OPLS/aa force field.
Regards,
Lal badshah.
*SYED LAL BADSHAH
M.Phil Scholar
NCE in Physical Chemistry,
University of Peshawar.
NWFP,Pakistan.
Cell # 03349060632.*
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