Hi all, I want to create an S-S bond within my peptide. So, I used the CYSH type cysteine residue and pdb2gmx with -ss option. However, I saw that the S-S bridge was formed between the ARG-CYS pair but not between the CYS-CYS pair.
So, I think -ss option with pdb2gmx is not enough to make this bond. What additional steps do I follow to construct this bond ? Thanks in advance Ozge Engin ================================= Computational Science & Engineering Koc University _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
