Thank a lot. I am getting the clue for it. Thank all of you. On Jan 23, 2008 4:50 AM, Mark Abraham <[EMAIL PROTECTED]> wrote:
> Nabajyoti Goswami wrote: > > Dear Gromacs Users, > > > > After a long time I am working with gromacs. Though at the starting I > > got some problem in installation with the rpm, (a conflict error with > > mono-web) I installed it anyway forcefully. Problem is the trajectory > > files that I am getting are too big. I have run a mdrun for 2ns on a > > protein+water system consisting of 60149 atoms in 18875 residues (as > > after running 'genbox' using spc216.gro). The .xtc, and .trr files I am > > getting are of 19GB and 12GB respectively. Is this normal, or I have > > some problem with my gromacs? My hard disk space is 80GB. I am just > > worrying about what should I do if I will have to run it for 4ns or more > > than that?? If these files are so big how many MD will I be able to run? > > Is double precision installation of gromacs helpful? will I get these > > trajectory files in some compressed format?? > > > http://wiki.gromacs.org/index.php/Using_Trajectory_Information#Reducing_Trajectory_Storage_Volume > > Mark > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Nabajyoti Goswami Ph.D Student. Center for Biotechnology, Anna University, Chennai-600025 Tamil Nadu. Mobile: 09840487093
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