can you please suggest what should i do? I have pbc = xyz in my md.mdp> Date:
Mon, 31 Dec 2007 08:17:15 +1100> From: [EMAIL PROTECTED]> To:
gmx-users@gromacs.org> Subject: Re: [gmx-users] problem in bilayer simulation>
> pragya chohan wrote:> > Dear Users> > I am doing membrane simulation
alternating nvt and npt during production > > run. After 1250 ps the water from
upper leaflet goes towards the lower > > leaflet and a very thin layer of water
remains in the upper leaflet. Is > > it a common occurance or am I doing some
mistake?> > Probably you are observing an artefact of periodic boundary
conditions - > see
http://wiki.gromacs.org/index.php/Periodic_Boundary_Conditions for > advice
here.> > Mark> _______________________________________________> gmx-users
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